-
Notifications
You must be signed in to change notification settings - Fork 254
Update install.sh #634
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Update install.sh #634
Conversation
The apptainer `install.sh` script is apparently failing silently. This fix should make Apptainer work again inside the container image.
✅ Deploy Preview for nextflow-training ready!
To edit notification comments on pull requests, go to your Netlify project configuration. |
|
I verified that this PR results in a successful apptainer installation. However, I ran into the following error when attempting to use apptainer in a codespace (using the "codespaces-dev" dev container, i.e. .devcontainer/codespaces-dev/devcontainer.json) : Ultimately the following dev container runArgs were required to resolve all errors with the above For the "local-dev" dev container (.devcontainer/local-dev/devcontainer.json), the following sufficed in my environment---RockyLinux 8.10 with rootless Podman: though the other two |
|
What's the status of this? Is it still needed, and if so what do we need to get it done? |
|
@mribeirodantas Is this good to go? |
|
Actually, no. Singularity is not even being installed anymore :|. As the only training using singularity is the archived one, I think we can close this with wontfix. |
|
Dropping this |
The apptainer
install.shscript is apparently failing silently. This fix should make Apptainer work again inside the container image.